Source code for neuroconv.datainterfaces.ophys.sima.simadatainterface

from pydantic import FilePath

from ..basesegmentationextractorinterface import BaseSegmentationExtractorInterface




class SimaSegmentationInterface(BaseSegmentationExtractorInterface):
    """Data interface for SimaSegmentationExtractor."""

    display_name = "SIMA Segmentation"
    associated_suffixes = (".sima",)
    info = "Interface for SIMA segmentation."



    @classmethod
    def get_extractor_class(cls):
        from roiextractors import SimaSegmentationExtractor

        return SimaSegmentationExtractor


    def __init__(self, file_path: FilePath, sima_segmentation_label: str = "auto_ROIs"):
        """

        Parameters
        ----------
        file_path : FilePath
        sima_segmentation_label : str, default: "auto_ROIs"
        """
        super().__init__(file_path=file_path, sima_segmentation_label=sima_segmentation_label)